BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017H01SP1|AL427215
(656 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1630 1070 0.0
>3x_Contig1630
Length = 14771
Score = 1070 bits (538), Expect = 0.0
Identities = 630/658 (95%), Gaps = 3/658 (0%)
Strand = Plus / Plus
Query: 1 atctatttctctttcttgcgtctacgaattcttgtaggaaaactttaccgaaaactttgt 60
||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |
Sbjct: 4119 atctatttctctttcttgcatctacgaattcttgtactaaaactttaccgaaaacttttt 4178
Query: 61 cagtttcatcttggaatatagtttcgaatataacagtgatacgatcaaaggacggcttga 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 4179 cagtttcatcttggaatatagtttctaatataacagtgatacgatcaaaggacggcttga 4238
Query: 121 tgtatatgttttcatcatctctgtatttgataaccatagccctggcctcctttgattttt 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 4239 tgtatatgttttcatcatctctttatttgataaccatagccctggcctcctttgattttt 4298
Query: 181 ccacttggtctatttcattcaattgagaaagagcattactctggccaaacgctaaataga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4299 ccacttggtctatttcattcaattgagaaagagcattactctggccaaacgctaaataga 4358
Query: 241 atggatatgacattacaaggatcttaaacaaagatgcttgcacaatagattgcgcagtga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4359 atggatatgacattacaaggatcttaaacaaagatgcttgcacaatagattgcgcagtga 4418
Query: 301 -tttgagatagatcaacagtaatggtaaaatcgtaaccggcctcctttttagcagatgat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 4419 ttttgagatagatcaacagtaatggtaaaatcgtaaccggcctcctttttagcagatgtt 4478
Query: 360 agagccaaacctggtacttcatcgaattttgcctgcmagaacccttgtmaatcgttccca 419
|||||| |||||||||||||||| | |||||| || |||||| |||| |||| ||||||
Sbjct: 4479 agagcc-aacctggtacttcatcaatttttgcaagcaagaaccattgttaatcattccca 4537
Query: 420 ctctcattacaagattgcgta-ccttggttctgatggaaactaataggttcgacttatca 478
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 4538 ctctcattacaagattgcgtagccttggttctgatggaaactaataggttcgacttatca 4597
Query: 479 gtgccatcgttggtgatgtgtaacgttgtataatcaaagtcggagatgattctgtccaaa 538
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 4598 gtgccatcgttggtgatgtgtaacgttgtataataaaagtcggagatgattctgtcaaaa 4657
Query: 539 gttaaaggagacccattgttgtcagcttccaaagcttctgttaatgtcttttggaccaat 598
||||||||||| |||||||| || || ||||||||||||||||||||||||||||||
Sbjct: 4658 gttaaaggagaaaaattgttgtaagattaaaaagcttctgttaatgtcttttggaccaat 4717
Query: 599 aggttgtatggtttaaggtgtaacattattatgtattgatattagaasgctcacaagt 656
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 4718 aggttgtatggtttaaggtgtaacattattatgtattgatattagaaggctcacaagt 4775
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5176
Number of Sequences: 1807
Number of extensions: 5176
Number of successful extensions: 122
Number of sequences better than 1.0e-20: 1
length of query: 656
length of database: 10,358,551
effective HSP length: 16
effective length of query: 640
effective length of database: 10,329,639
effective search space: 6610968960
effective search space used: 6610968960
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)